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WGA Rescources

Abstract #117093 Published in IGR 24-4

A multi-cohort genome-wide association study in African ancestry individuals reveals risk loci for primary open-angle glaucoma

Verma SS; Gudiseva HV; Chavali VRM; Salowe RJ; Bradford Y; Guare L; Guare L; Lucas A; Collins DW; Vrathasha V; Nair RM; Rathi S; Zhao B; He J; Lee R; Zenebe-Gete S; Bowman AS; McHugh CP; Zody MC; Pistilli M; Khachatryan N; Daniel E; Murphy W; Henderer J; ; Kinzy TG; Iyengar SK; Peachey NS; Taylor KD; Guo X; Chen YI; Zangwill L; Girkin C; Ayyagari R; Liebmann J; Chuka-Okosa CM; Williams SE; Akafo S; Budenz DL; Olawoye OO; Ramsay M; Ashaye A; Akpa OM; Aung T; Wiggs JL; Ross AG; Cui QN; Addis V; Lehman A; Miller-Ellis E; Sankar PS; Williams SM; Ying GS; Cooke Bailey J; Rotter JI; Weinreb R; Khor CC; Hauser MA; Ritchie MD; O'Brien JM
Cell 2024; 187: 464-480.e10


Primary open-angle glaucoma (POAG), the leading cause of irreversible blindness worldwide, disproportionately affects individuals of African ancestry. We conducted a genome-wide association study (GWAS) for POAG in 11,275 individuals of African ancestry (6,003 cases; 5,272 controls). We detected 46 risk loci associated with POAG at genome-wide significance. Replication and post-GWAS analyses, including functionally informed fine-mapping, multiple trait co-localization, and in silico validation, implicated two previously undescribed variants (rs1666698 mapping to DBF4P2; rs34957764 mapping to ROCK1P1) and one previously associated variant (rs11824032 mapping to ARHGEF12) as likely causal. For individuals of African ancestry, a polygenic risk score (PRS) for POAG from our mega-analysis (African ancestry individuals) outperformed a PRS from summary statistics of a much larger GWAS derived from European ancestry individuals. This study quantifies the genetic architecture similarities and differences between African and non-African ancestry populations for this blinding disease.

Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.

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15 Miscellaneous



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